2025

Hoffmann L, Palt M, Mignien L, Uhler J, Haase P, Müller J., Stoll S (2025, accepted) Effects of species traits on the catchability of butterflies with different types of Malaise traps and implications for total catch biomass. Journal of Insect Conservation

2024

Sinclair JS, Buchner D, Gessner MO, Müller J, Pauls SU, Stoll S, Welti EAR, Bässler C, Buse J, Dziock F, Enss J, Hörren T, Künast R, Li Y, Marten A, Morkel C, Richter R, Scharnweber T, Seibold S, Sorg M, Twietmeyer S, Weis D, Weisser W, Wiggering B, Wilmking M, Zotz G, Frenzel M, Leese F, Haase P (2024) Effects of land cover and protected areas on flying insect diversity. Conservation Biology: c14425. DOI: 10.1111/cobi.14425

Buchner D, Sinclair JS, Ayasse M, Beermann AJ, Buse J, Dziock F, Enss J, Frenzel M, Hörren T, Li Y, Monaghan MT, Morkel C, Müller J, Pauls SU, Richter R, Scharnweber T, Sorg M, Stoll S, Twietmeyer S, Weisser WW,  Wiggering B,  Wilmking M,  Zotz G, Gessner MO, Haase P,  Leese F [2024] Upscaling biodiversity monitoring: Metabarcoding estimates 31,846 insect species from Malaise traps across Germany. Molecular Ecology Resources 00: e14023. DOI: 10.1111/1755-0998.14023

Mignien L, Stoll S (2024) Reproductive success of stream fish species in relation to high and low flow patterns: the role of life history strategies and species traits. Science of the Total Environment 946: 174366. DOI: 10.1016/j.scitotenv.2024.174366

Welti EAR, Bowler DE, Sinclair JS, Altermatt F, Álvarez-Cabria, Amatulli, Angeler DG, Archambaud, Jorrín IA, Aspin T, Azpiroz I, Baker NJ, Bañares I, OrtizJB, Bodin CL, Bonacina L, Bonada N, Bottarin R, Cañedo-Argüelles M, Csabai Z, Datry T, de Eyto E,  Dohet A, Domisch S, Dörflinger G, Drohan E, Eikland KA, England J, Eriksen TE, Evtimova V, Feio MJ, Ferréol M, Floury M, Forcellini M, Forio MAE, Fornaroli R, Friberg N, Fruget JF, Marquez JRG, Georgieva G, Goethals P, Graça MAS, House A, Huttunen KL, Jensen TC, Johnson RK, Jones JI, Kiesel J, Larrañaga A, Leitner P, L´Hoste L, Lizée ML, Lorenz AW, Maire A, Arnaiz JAM, Mckie B, Millán A, Muotka T, Murphy JF, Ozolins D, Paavola R, Paril P, Silva FJPS, Polasek M, Rasmussen J, Rubio M, Fernández DS, Sandin L, Schäfer RB, Schmidt-Kloiber A, Scotti A, ShenLQ, Skuja A, Stoll S, Straka M, Stubbington R , Timm H,Tyufekchieva VG, Tziortzis I, Uzunov Y, van der Lee GH, Vannevel R, Varadinova E, Várbíró G, Velle G, Verdonschot PFM, Verdonschot RCM, Vidinova Y, Wiberg-Larsen P, Haase P [2024]  Time series of freshwater macroinvertebrate abundances and site characteristics of European streams and rivers. Scientific Data 11: 601. DOI: 10.1038/s41597-024-03445-3

Boussinet E, Nachón DJ, Sottolichio A, Lochet A, Stoll S, Bareille G, Tabouret H, Pécheyran C, Acolas ML, Daverat F, (2024) Juvenile downstream migration patterns of an anadromous fish, allis shad (Alosa alosa), before and after the population collapse in the Gironde system, France. Journal of Fish Biology. DOI: 10.1111/jfb.15647

2023

Haase P, Bowler DE, Baker NJ, Bonada N, Domisch S, Marquez JRG, Heino J, Hering D, Jähnig SC, Schmidt-Kloiber A, Stubbington R, Altermatt F, Álvarez-Cabria M, Amatulli G, Angeler DG, Archambaud-Suard G, Jorrín IA, Aspin T, Azpiroz I, Bañares I, Ortiz JB, Bodin CL, Bonacina L, Bottarin R, Cañedo-Argüelles M, Csabai Z, Datry T, de Eyto E, Dohet A, Dörflinger G, Drohan E, Eikland KA, England J, Eriksen TE, Evtimova V, Feio MJ, Ferréol M,Floury M, Forcellini M, Forio MAE, Fornaroli R, Friberg N, Fruget JF, Georgieva G, Goethals P, Graça MAS, Graf W, House A, Huttunen KL, Jensen TC, Johnson RK, Jones JI, Kiesel J, Kuglerová L, Larrañaga A, Leitner P, L’Hoste L, Lizée MH, Lorenz AW, Maire A, Manzanos Arnaiz JA, McKie BG, Millán A, Monteith D, Muotka T, Murphy JF, Ozolins  D, Paavola R, Paril P, Peñas FJ, Pilotto F, Polášek M, Rasmussen JJ, Rubio M, Sánchez-Fernández D,  Sandin L, Schäfer RB, Scotti A, Shen LQ, Skuja A, Stoll S, Straka M, Timm H, Tyufekchieva VG, Tziortzis I, Uzunov Y, van der Lee GH, Vannevel R, Varadinova E, Várbíró G, Velle G, Verdonschot PFM, Verdonschot RCM, Vidinova Y, Wiberg-Larsen P, Welti EAR (2023) The recovery of European freshwater biodiversity has come to a halt. Nature 620: 582–588. DOI: 10.1038/s41586-023-06400-1

Schröter M, Berbés-Blázquez M, Albert C, Hill R, Krause T, Loos J, Mannetti L M., Martín-López B, Neelakantan A, Parrotta JA, Quintas-Soriano C, Abson DJ, Alkemade R, Amelung B, Baptiste B, Barrios E, Djoudi H,  Drakou EG, Durance I, García Llorente M, Geneletti D, Harmáčková ZV, Jacobs S, Kaiser NN, Kingsley J, Klain S,  Martínez-Harms M José, Murali R, O’Farrell P, Pandit R, Pereira L, Rana S, Riechers M, Rusch GM, Sala JE, Schulp CJE, Sitas N, Subramanian SM, Villasante S & Oudenhoven A v (2023) Science on ecosystems and people to support the Kunming-Montreal Global Biodiversity Framework, Ecosystems and People, 19:1, DOI: 10.1080/26395916.2023.2220913

Arce, A. P., Palt, M., Schletterer, M., & Kail, J. (2023). Has riparian woody vegetation a positive effect on dispersal and distribution of mayfly, stonefly and caddisfly species? Science of The Total Environment879, 163137.

Palt M, Hering D, Kail J (2023) Context-specific positive effects of woody riparian vegetation on aquatic invertebrates in rural and urban landscapes. Journal of Applied Ecology 60: 1010-1021. DOI: 10.1111/1365-2664.14386

Mignien L, Stoll S (2023) Effects of high and low flows on abundances of fish species in Central European headwater streams: The role of ecological species traits. Science of the Total Environment 888: 163944. DOI: 10.1016/j.scitotenv.2023.163944

Manfrin A, Pilotto F, Larsen S, Tonkin JD, Lorenz AW, Haase P, Stoll S (2023) Taxonomic and functional reorganisation in Central European stream macroinvertebrate communities over 25 years. Science of the Total Environment 889: 164278. DOI: 10.1016/j.scitotenv.2023.164278

Ghermandi A, Langemeyer J, Van Berkel D, Calcagni F, Depietri Y, Egarter Vigl L, Fox N, Havinga I, Jäger H, Kaiser N, Karasov O, McPhearson T, Podschun S, Ruiz-Frau A, Sinclair M, Venohr M, Wood SA (2023) Social media data for environmental sustainability: A critical review of opportunities, threats, and ethical use. One Earth Volume 6:  236-250. DOI: 10.1016/j.oneear.2023.02.008

Marsh CJ, Gavish Y, Kuemmerlen M, Stoll S, Haase P, Kunin B (2023) SDM profiling: a tool for assessing the information-content of sampled and unsampled locations for species distribution models. Ecological Modelling 475, 110170. DOI: 10.1016/j.ecolmodel.2022.110170  

2022

Uhler J, Haase P, Hoffmann L, Hothorn T, Schmidl J, Stoll S, Welti EAR, Buse J, Müller J (2022) A comparison of different Malaise trap types. Insect Conservation and Diversity 15: 666–672. DOI: 10.1111/icad.12604

Meißner T, Remmers W, Stoll S (2022) Die Bäche im Hunsrück - aktueller Zustand und Herausforderungen für die Zukunft. In: Hunsrückverein e.V. [Hrsg.] Jahrbuch des Hunsrückvereins 2022, 140 - 145, Königsau.

Lembrechts JJ, van den Hoogen J, Aalto J, …, Remmers W, ..., Stoll S, …, Nijs I, Lenoir J (2022) Global maps of soil temperature. Global Change Biology 28: 3110-3144. DOI: 10.1111/gcb.16060

Welti EAR, Zajicek P, Frenzel M, Ayasse M, Bornholdt T, Buse J, Classen A, Dziock F,  Engelmann RA, Englmeier J, Fellendorf M, Förschler MI, Fricke U, Ganuza C, Hippke M, Hoenselaar G, Kaus-Thiel A, Kerner J, Kilian D, Mandery K, Marten A, Monaghan MT, Morkel C, Müller J, Puffpaff S, Redlich S, Richter R, Rojas-Botero S, Scharnweber T, Scheiffarth G, Schmidt Yáñez P, Schumann R, Seibold S, Steffan-Dewenter I, Stoll S, Tobisch C, Twietmeyer S, Uhler J, Vogt J, Weis D, Weisser WW, Wilmking M, Haase P (2022) Temperature drives variation in flying insect biomass across a German malaise trap network. Insect Conservation and Diversity 15: 168–180. DOI: 10.1111/icad.12555

2021

Stoll S, Wagner G (2021) Biomonitoring. In: Fischer-Stabel P [Hrsg] Umweltinformationssysteme 3rd ed, 93 – 104, Wichmann, Berlin. ISBN: 978-3-87907-700-7

Remmers W, Meißner T, Stoll S [2021] Der ökologische Zustand der Bäche im Nationalpark Hunsrück-Hochwald – Diversität, Belastungen und Bewertung. In: Nationalparkamt Hunsrück-Hochwald (Hrsg.) Forschungsband 1  "Dynamik im Fokus", 200 -207, Birkenfeld.

Kwon T, Shibata H, Kepfer-Rojas S, Schmidt IK, Larsen KS, Beier C, Berg B, Verheyen K, Lamarque J-F, Hagedorn F, Eisenhauer N, Djukic I, and TeaComposition Network* [2021] Effects of climate and atmospheric nitrogen deposition on early to mid-term stage litter decomposition across biomes. Frontiers in Forests and Global Change 4: 678480. DOI: 10.3389/ffgc.2021.678480
*S Stoll is part of TeaComposition Network

Kaiser N, Ghermandi A, Feld  CK, Hershkovitz Y, Palt M, Stoll S (2021) Societal benefits of river restoration – Implications from social media analysis. Ecosystem Services 50: 101317

2020

Kaiser N, Feld CK, Stoll S [2020] Does river restoration increase ecosystem services? A review. Ecosystem Services 46: 101206.

Kusanke LM, Panteleit J, Stoll S, Korte E, Sünger E, Schulz R,  Theissinger K (2020) Detection of the endangered European weather loach (Misgurnus fossilis) via water and sediment samples: Testing multiple eDNA workflows. Ecology and Evolution 10: 8331-8344.

Pilotto F, Kühn I, Adrian R, Alber R, Alignier A,  Andrews C, Bäck J, Barbaro L, Beaumont D, Beenaerts N, Benham S, Boukal DS, Bretagnolle V, Camatti E, Canullo R, Cardoso P, Ens BJ, Everaert G, Evtimova V, Feuchtmayr H, García-González R, Gómez García D, Grandin U, Gutowski JM, Hadar L, Halada L, Halassy M, Hummel H, Huttunen KL, Jaroszewicz B, Jensen TC, Kalivoda H, Kappel Schmidt I, Kröncke I, Leinonen R, Martinho F, Meesenburg  H, Meyer J, Minerbi S, Monteith D, Nikolov BP, Oro D, Ozoliņš D, Padedda BM, Pallett D, Pansera M, Pardal MA, Petriccione B, Pipan T, Pöyry J, Schäfer SM, Schaub M, Schneider SC, Skuja A, Soetaert K, Spriņģe G, Stanchev R, Stockan JA, Stoll S, Sundqvist L, Thimonier A, Van Hoey G, Van Ryckegem G, Visser ME, Vorhauser S, Haase P (2020) Meta-analysis of multidecadal biodiversity trends in Europe. Nature Communications 11: 3486.

de Necker L, Manfrin A, Ikenaka Y, Ishizuka M, Brendonck L, van Vuren JHJ, Sures B, Wepener V, Smit NJ (2020): Using stable δ13C and δ15N isotopes to assess foodweb structures in an African subtropical temporary pool. African Zoology 55: 79-92.

Manfrin A, Bunzel-Drüke M, Lorenz AW, Maire A, Scharf M, Zimball O, Stoll S (2020) The effect of lateral connectedness on the taxonomic and functional structure of fish communities in a lowland river floodplain. Science of the Total Environment 719: 137169.

Schmidt H, Radinger J, Teschlade D, Stoll S (2020) The role of spatial units in modelling freshwater fish distributions: Comparing a subcatchment and river network approach using MaxEnt. Ecological Modelling 418: 108937

2019

Manfrin A, Teurlincx S, Lorenz AW, Haase P, Marttila M, Syrjänen J, Thomas G, Stoll S (2019) Effect of river restoration on life-history strategies in fish communities. Science of the Total Environment 663: 486-495.

Wittwer C, Stoll S, Thines M, Nowak C (2019) eDNA-based crayfish plague detection as practical tool for biomonitoring and risk assessment of A. astaci-positive crayfish populations. Biological Invasions 21(4): 1075–1088.

Haase P*, Pilotto F*, Li F*, Sundermann A, Lorenz AW, Tonkin AD, Stoll S (2019) Moderate warming over the past 25 years has reorganized stream invertebrate communities. Science of the Total Environment 658: 1531-1538.

Pilotto F, Tonkin JD, Januschke K, Lorenz AW, Jourdan J, Baranov V, Sundermann S, Hering D, Stoll S, Haase P (2019) Diverging response patterns of terrestrial and aquatic species to restoration. Conservation Biology 33: 132-141.

2018

Wittwer C, Nowak C, Strand DA, Vrålstad T, Thines M, Stoll S (2018) Comparison of two water sampling approaches for eDNA-based crayfish plague detection. Limnologica 70: 1-9.

Wetzel FT, Bingham HC, Groom Q, Haase P, Köljalg U, Kuhlmann M, Martin CS, Penev L, Robertson T, Saarenmaa H, Schmeller DS, Stoll S, Tonkin JD, Häuser CL (2018) Real gaps in European bird monitoring: A reply to Voříšek et al. Biological Conservation 225: 247-248.

Manfrin A, Larsen S, Scalici M, Wuertz S, and Monaghan MT (2018). Stress response of Chironomus riparius to changes in water temperature and oxygen concentration in a lowland stream. Ecological Indicators 95: 720-725.

Manfrin A, Lehmann D, van Grunsven RHA, Larsen S, Syväranta J, Wharton G, Voigt CC, Monaghan MT, and Hölker F (2018). Dietary changes in predators and scavengers in a nocturnally illuminated riparian ecosystem. Oikos 127: 960-969.

Grubisic M, van Grunsven RHA, Manfrin A, Monaghan MT, and Hölker F (2018). Insect declines and agroecosystems: does light pollution matter? Annals of Applied BiologyDOI: 10.1111/aab.12440.

Wetzel FT, Bingham HC, Groom Q, Haase P, Köljalg U, Kuhlmann M, Martin CS, Penev L, Robertson T, Saarenmaa H, Schmeller DS, Stoll S, Tonkin JD, Häuser CL (2018) Unlocking biodiversity data: Prioritization and filling the gaps in biodiversity observation data in Europe. Biological Conservation 221: 78–85.

Djukic I, Kepfer-Rojas S, Kappel Schmidt I, Steenberg Larsen K, Beier C, Berg B, Verheyen K, …, Stoll S, et al. (2018) Early stage litter decomposition across biomes. Science of the Total Environment 628–629: 1369–1394.

Wittwer C, Stoll S, Strand D, Vrålstad T, Nowak C, Thines M (2018) eDNA-based crayfish plague monitoring is superior to conventional trap-based assessments in year-round detection probability. Hydrobiologia 807: 87–97.

Haase P*, Tonkin JD*, Stoll S*, Burkhard B, Frenzel M, Geijzendorffer IR, Häuser C, Klotz S, Kühn I, Mirtl M, Müller F, Musche M, Penner J, Zacharias S, Schmeller DS (2018) Next generation of site-based long-term ecological monitoring: Linking Essential Biodiversity Variables and Ecosystem Integrity. Science of the Total Environment 613-614: 1376-1384.

Schmeller DS, Weatherdon LV, Loyau A, Bondeau A, Brotons L, Brummitt N, Geijzendorffer IR, Haase P, Kuemmerlen M, Martin C, Mihoub J-B, Rocchini D, Saarenmaa H, Stoll S, Regan E (2018) A suite of essential biodiversity variables for detecting critical biodiversity change. Biological Reviews 93: 55-71.

2017

Gabel F, Lorenz S, Stoll S (2017) Effects of ship-induced waves on aquatic ecosystems. Science of the Total Environment 601-602: 926-939.

Bowler D, Haase P, Hof C, Kröncke I, Baert L, Domisch S, Dekoninck W, Hendrickx F, Hickler T, Neumann H, O’Hara R, Sell A, Sonnewald M, Stoll S, Türkay M, van Klink R, Schweiger O, Vermeulen R, Böhning-Gaese K (2017) Cross-taxa generalities in the relationship between population abundance and ambient temperatures. Proceedings of the Royal Society B: Biological Sciences 284: 20170870.

+Höckendorff S, Tonkin JD, Haase P, Bunzel-Drüke M, Zimball O, Scharf M, Stoll S (2017) Characterizing fish responses to a river restoration over 21 years based on species traits. Conservation Biology 31: 1098-1108.

Peer-reviewed publications (*equal contribution, +supervised student)
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Stefan Stoll
Nina N. Kaiser
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